Details
| Technique | Tomo-seq |
|---|---|
| Title | Genome-wide RNA tomography in the zebrafish embryo |
| PMID | 25417113 |
| Description | This study combined traditional histological techniques with low-input RNA sequencing and mathematical image reconstruction to generate a high-resolution genome-wide 3D atlas of gene expression in the zebrafish embryo at three developmental stages. |
| Source | the yolk and straightened zebrafish embryos at the 15 somites stage (fish lines: TL, Tg(h2afva:h2afva-mCherry)) |
| Species | zebrafish |
| No. genes | 14254 genes |
| No. cells | NA |
| Resolution | cellular |
| Data normalization | Spike-in normalization |
| Data availability | GSE59873 |